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. 2005 Apr;25(7):2819–2831. doi: 10.1128/MCB.25.7.2819-2831.2005

TABLE 1.

MS/MS analysis of the band isolated from the native acrylamide gel in Fig. 4B

Reference no. Protein name Species No. of peptides Present in SDS bands from Fig. 4Ca
gi 22090626 HECT domain protein LASU1 Homo sapiens 68 A,B,C
gi 26340188 Unnamed protein product Mus musculus 20 B,C
gi 10436857 Unnamed protein product Homo sapiens 3 A
gi 25140230 Similar to tripeptidyl peptidase II Homo sapiens 7 B
gi 1061310 Valyl-tRNA synthetase 7 B
gi 2493459 Protein kinase C substrate, 60.1-kDa protein, heavy chain (PKCSH) (80K-H protein) Bostauras 3 A
gi 28478776 Similar to elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma) Mus musculus 7
gi 28189194 Similar to pancreatic tumor-related protein Bos taurus 3
gi 417844 Valyl-tRNA synthetase (valinetRNA Ligase) (VALRS) 2
gi 27807311 Vesicle docking protein p115 Bos taurus 5
gi 232037 Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma) Oryctolagus cuniculus 3
gi 12804891 Similar to tubulin; beta 5 Homo sapiens 4
gi 6015101 Endoplasmin (94-kDa glucose-regulated protein) (GRP94) Oryctolagus cuniculus 5
gi 25021127 Similar to transitional endoplasmic reticulum ATPase (EC 3.6.1.) (validated), rat Mus musculus 2
gi 4204880 Heat shock protein Homo sapiens 3
gi 11265337 Hypothetical protein DKFZp434K0126.1, human (fragment) Homo sapiens 3
gi 1174593 Tubulin alpha-2/alpha-4 chain Patella vulgata 2
gi 12847562 Unnamed protein product Musmusculus 2
a

Proteins also detected in the tandem mass spectrometry analysis reports of bands A, B, or C from the denaturing gel (Fig. 4C) are indicated.

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